Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907705.1_cds_XP_016457815.1_51503
CDS Infomation

[gene=LOC107781594] [db_xref=GeneID:107781594] [protein=DEAD-box ATP-dependent RNA helicase 7-like] [protein_id=XP_016457815.1] [location=complement(join(10476..10660,10845..10978,11143..11237,11318..11414,11497..11665,11752..11812,11896..11997,12265..12376,12480..12634,12842..12912,13115..13226,13335..13475,13564..13698,14415..14894))] [gbkey=CDS]
Sequence

ATGCCTGCACTTGTTGTAAGTGAAACAATGGGGTCTGAAGAGCCGAAAGAGCTGAAGAAG
AAGATGAAGAAGAGCGAAAAAGGGTCATCCGCCGACACCCTTAAAAAGTCGAAAAAGACC
AAGATTGATTCTGGGTCTGATTCAGAAGAGCTTAAGAAGAGTAAGAAGAAAGATAAGAAG
CGAAAATATTTAAACTTGGATGATGAGGAGGACGATGATAGTTCGGAGATACTGGAGCCG
AGTAATTTGAATGGGGATGACAAGAAGGAAAAGGCTAAATTGGTGGAGAATGATGATGAT
GAGGAGAAAAAGGAGGAGAAAGAGGAGGATCCTAACGCTTTGTCTAATTTTAGGATTTCT
GTGCCTTTAAGAGAGGCTTTGATTGCTAAGGGTATTCAAGCGCTCTTTCCTATTCAAGCT
ATGACTTTTGATACCATCTTTGATGGAAATGACTTAGTTGGTCGAGCTCGCACTGGTCAG
GGTAAAACATTGGCCTTTGTGTTGCCCATATTGGAGTCCCTGACAAATGGTCCTACTAAA
GCGTCTCGGAAAACAGGGTATGGGAGGGCTCCTTGTGTTTTGGTGCTTTTACCTACTAGG
GAATTGGCACTTCAGGTGTTTGCTGACTTTGAAGTTTATGGTCGGACCGTGGGGCTTACT
TCATGTTGTTTGTATGGAAATTCTCCAATGGGACAACAACAAGTGCAATTGAAACGAGGA
GTTGATATTGTTGTGGGTACTCCTGGAAGAGTTAAGGACCACATTGAAAGAGGAAATATT
GATTTCAGGTCTCTAAAGTTCCGTGTTCTTGATGAAGTTGATGAAATGCTGAAAATTGGT
TTTGTTGATGATGTGGAATTTATATTAGGCAAGGTAGAAGATGCAAGCCAAGTTCAAACA
CTTCTTTTCAGTGCCACTTTGCCAAGCTGGGTGAAGCATATATCTTATAAGTTTCTCAAA
CCTGATAAGAAAACAGCTGATCTTGTTGGTGATGAGAAAATGAAGGCCAGTAAGAATGTG
AGACATATCATTATACCATGCTCTAGTTCAGCCAGAACTCAGCTGATTCCTGATATTATT
CGCTGCTACAGCAGTGGTGGCCGCACTATTATTTTCACTGAAACAAGGGGTTATGCTTCT
GAGCTAGCCGGCTTATTGCCGGGAGCACGTGCTTTGCATGGAGAGATACAACAGTCCCAG
CGTGAGGTTACACTCTCTGGATTCAGATCAGGAAAATTCCTGACATTAGTGGCGACAAAT
GTAGCAGCCCGTGGATTGGATATTGACGACGTTCAATTAATTATTCAGTGTGAGCCTCCA
CGCGACGTCGAAGCGTATATTCATCGATCTGGAAGGACAGGAAGGGCAGGAAATACTGGT
GTGGCGGTAATGCTTTATGATCCTAAGAAGTCCAACATTTCTAGGATTGAAAGAGAATCT
GGTGTGAAGTTCGAGCATCTATCTGCTCCACAGCCCGCTGATGTTGCTAAAGCGGCTGGG
AAAGAAGCAGCAGAAGCAGTTGCTGAAATTTCTGATAGTGTAATACCTGCTTTCAAGGCT
GCTGCTGAGGAACTTCTAAACACCTCTGAACTATCACCAGCAGAATTGCTTGCCAAGGCA
CTTGCCAAGGCAGCTGGCTACTCTGAGATCAAGACTCGGTCGCTTCTTTCTTCCATGGAG
AACTGTGTTACTCTACTTCTCGAGTGTGGGAGGCCCATATTTGCACCTTCCTTTGCATAT
AATGTTTTGCGGAGGTTCCTACCAGAGGACAAGGTTGAATCAATCAAAGGTCTTACTTTG
ACAGCTGATGGAAAGGGCGCGGTTTTTGATGTATCTGCTGATGACCTGGATATGTTTCTA
GCAGGGAAGAATACCCAAGGTGTAAACTTAGAGGTAGTAAAAGAACTGCCTCGGTTGCAA
GAGAAAGACCAGGCAAGAGGTGGAAGATTTGGTGGTGGTCGTGGTGGCTTCTATGACAGG
AGAGGTGGTGGTCGCTTTTCCGGAGGCAGAGGTGGAAGAGGTCGCGGAAACTTCGGCCGT
AGATGGTGA

Peptide Sequence

PEP ID

XP_016457815.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Nicotiana tabacum]
Sequence

MPALVVSETMGSEEPKELKKKMKKSEKGSSADTLKKSKKTKIDSGSDSEELKKSKKKDKK
RKYLNLDDEEDDDSSEILEPSNLNGDDKKEKAKLVENDDDEEKKEEKEEDPNALSNFRIS
VPLREALIAKGIQALFPIQAMTFDTIFDGNDLVGRARTGQGKTLAFVLPILESLTNGPTK
ASRKTGYGRAPCVLVLLPTRELALQVFADFEVYGRTVGLTSCCLYGNSPMGQQQVQLKRG
VDIVVGTPGRVKDHIERGNIDFRSLKFRVLDEVDEMLKIGFVDDVEFILGKVEDASQVQT
LLFSATLPSWVKHISYKFLKPDKKTADLVGDEKMKASKNVRHIIIPCSSSARTQLIPDII
RCYSSGGRTIIFTETRGYASELAGLLPGARALHGEIQQSQREVTLSGFRSGKFLTLVATN
VAARGLDIDDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPKKSNISRIERES
GVKFEHLSAPQPADVAKAAGKEAAEAVAEISDSVIPAFKAAAEELLNTSELSPAELLAKA
LAKAAGYSEIKTRSLLSSMENCVTLLLECGRPIFAPSFAYNVLRRFLPEDKVESIKGLTL
TADGKGAVFDVSADDLDMFLAGKNTQGVNLEVVKELPRLQEKDQARGGRFGGGRGGFYDR
RGGGRFSGGRGGRGRGNFGRRW

Transcript Sequence

Gene sequence data has not been registered.